> On Oct 17, 2017, at 1:43 AM, Rainer Krug <Rai...@krugs.de> wrote:
>
> Hi
>
> One question about home-brew installation:
>
> After upgrading to High Sierra (and update to R 3.4.2), I don’t get tcl-tk support in R.
>
> I get the following error:
>
> > library(tcltk)
> Error: package or namespace load failed for ‘tcltk’:
> .onLoad failed in loadNamespace() for 'tcltk', details:
> call: fun(libname, pkgname)
> error: Tcl/Tk support is not available on this system
> In addition: Warning message:
> S3 methods ‘as.character.tclObj’, ‘as.character.tclVar’, ‘as.double.tclObj’, ‘as.integer.tclObj’, ‘as.logical.tclObj’, ‘as.raw.tclObj’, ‘print.tclObj’, ‘[[.tclArray’, ‘[[<-.tclArray’, ‘$.tclArray’, ‘$<-.tclArray’, ‘names.tclArray’, ‘names<-.tclArray’, ‘length.tclArray’, ‘length<-.tclArray’, ‘tclObj.tclVar’, ‘tclObj<-.tclVar’, ‘tclvalue.default’, ‘tclvalue.tclObj’, ‘tclvalue.tclVar’, ‘tclvalue<-.default’, ‘tclvalue<-.tclVar’, ‘close.tkProgressBar’ were declared in NAMESPACE but not found
>
>
> Is this a problem on my side, or is there a problem with R & homebrew & High Sierra & tcl-tk?
For some reason, if you just install R on Mac OS X, you don't have a working Tcl/Tk by default. The problem manifests itself like this: tkplot(g) Loading required package: tcltk Loading Tcl/Tk interface. Error:.onLoad failed in loadNamespace for 'tcltk', details: call: dyn.load(file, DLLpath = DLLpath.). I was not sure whether the list of items included: 'Intel Macs, Tcl/Tk 8.6.6 X11 libraries and Texinfo 5.2' was missing a comma between 8.6.6 and X11 libraries or conversely that TCL/Tk 8.6.6 was supposed to indicate a particular version of Quartz. The Tcl/Tk interface can successfully load. See for details. From within the R console, the package can be installed with: install.packages('MAR1', repos='dependencies=TRUE) To load the MAR1 package in the current R session: library(MAR1) Prepare the dataset.
The R-Tcl/Tk interface Peter Dalgaard Abstract The tcltk package allows the use of the Tk graphical user interface ele-ments from within R by embedding Tk commands into the R language. The design considerations are discussed, and also the shortcomings of the current implementation. Tcl is not the fastest in heavy number-crunching, as needed when going over many thousands of pixels, but I wouldn't consider C for a fun project;) So take your time, or get a real CPU. At least you can watch the progress, as the target image is updated after every row. Edge enhancement by Laplace5 filter.
Caveat. I know almost nothing about homebrew other than its function and the fact that users of it often have problems with installing R properly. The CRAN page for the Mac R 3.4.2 fork says:
-------begin-------
Contains R 3.4.2 framework, R.app GUI 1.70 in 64-bit for Intel Macs, Tcl/Tk 8.6.6 X11 libraries and Texinfo 5.2. The latter two components are optional and can be ommitted when choosing 'custom install', they are only needed if you want to use the tcltk R package or build package documentation from sources.
Contains R 3.4.2 framework, R.app GUI 1.70 in 64-bit for Intel Macs, Tcl/Tk 8.6.6 X11 libraries and Texinfo 5.2. The latter two components are optional and can be ommitted when choosing 'custom install', they are only needed if you want to use the tcltk R package or build package documentation from sources.
-----end----
So it makes me wonder if you need to add the correct versions of the underlying system packages in a manner that your homebrew installation can find them. (the 3.3 fork uses a differnt version of Tcl/Tk.)
--
David.
>> _______________________________________________
> Thanks,
>
> Rainer
>
>
> --
> Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany)
>
> University of Zürich
>
> Cell: +41 (0)78 630 66 57
> email: Rai...@krugs.de
> Skype: RMkrug
>
> PGP: 0x0F52F982
>
>
>
> R-SIG-Mac mailing list
> R-SI...@r-project.org
R Sig Mac Problem Loading Tcl Tk Interface On R For Macbook Pro
> https://stat.ethz.ch/mailman/listinfo/r-sig-mac
R Sig Mac Problem Loading Tcl Tk Interface On R For Mac Osx
David Winsemius
Alameda, CA, USA
'Any technology distinguishable from magic is insufficiently advanced.' -Gehm's Corollary to Clarke's Third Law
_______________________________________________
R-SIG-Mac mailing list
R-SI...@r-project.org
https://stat.ethz.ch/mailman/listinfo/r-sig-mac
This directory contains binaries for a base distribution and packages to run on Mac OS X (release 10.6 and above). Mac OS 8.6 to 9.2 (and Mac OS X 10.1) are no longer supported but you can find the last supported release of R for these systems (which is R 1.7.1) here. Releases for old Mac OS X systems (through Mac OS X 10.5) and PowerPC Macs can be found in the old directory.
Note: CRAN does not have Mac OS X systems and cannot check these binaries for viruses.Although we take precautions when assembling binaries, please use the normal precautions with downloaded executables.
Package binaries for R versions older than 3.2.0 are only available from the CRAN archive so users of such versions should adjust the CRAN mirror setting (https://cran-archive.r-project.org) accordingly.
R Sig Mac Problem Loading Tcl Tk Interface On R For Mac Os
R 4.0.3 'Bunny-Wunnies Freak Out' released on 2020/10/10
Please check the MD5 checksum of the downloaded image to ensure that it has not been tampered with or corrupted during the mirroring process. For example type
openssl sha1 R-4.0.3.pkg
in the Terminal application to print the SHA1 checksum for the R-4.0.3.pkg image. On Mac OS X 10.7 and later you can also validate the signature using
pkgutil --check-signature R-4.0.3.pkg
Latest release:
| R-4.0.3.pkg (notarized and signed) SHA1-hash: 8402f586aef1fdb12c6e34c73b286f87318fb1be (ca. 85MB) | R 4.0.3 binary for macOS 10.13 (High Sierra) and higher, signed and notarized package. Contains R 4.0.3 framework, R.app GUI 1.73 in 64-bit for Intel Macs, Tcl/Tk 8.6.6 X11 libraries and Texinfo 6.7. The latter two components are optional and can be ommitted when choosing 'custom install', they are only needed if you want to use the tcltk R package or build package documentation from sources. Note: the use of X11 (including tcltk) requires XQuartz to be installed since it is no longer part of OS X. Always re-install XQuartz when upgrading your macOS to a new major version. Important: this release uses Xcode 10.1 and GNU Fortran 8.2. If you wish to compile R packages from sources, you will need to download and GNU Fortran 8.2 - see the tools directory. |
| NEWS (for Mac GUI) | News features and changes in the R.app Mac GUI |
| Mac-GUI-1.73.tar.gz SHA1-hash: 7f4b1d050757ce78545bdeb9d178a69d13046aa1 | Sources for the R.app GUI 1.73 for Mac OS X. This file is only needed if you want to join the development of the GUI, it is not intended for regular users. Read the INSTALL file for further instructions. |
Note: Previous R versions for El Capitan can be found in the el-capitan/base directory.Binaries for legacy OS X systems: | |
| R-3.6.3.nn.pkg (signed) SHA1-hash: c462c9b1f9b45d778f05b8d9aa25a9123b3557c4 (ca. 77MB) | R 3.6.3 binary for OS X 10.11 (El Capitan) and higher, signed package. Contains R 3.6.3 framework, R.app GUI 1.70 in 64-bit for Intel Macs, Tcl/Tk 8.6.6 X11 libraries and Texinfo 5.2. The latter two components are optional and can be ommitted when choosing 'custom install', they are only needed if you want to use the tcltk R package or build package documentation from sources. |
| R-3.3.3.pkg MD5-hash: 893ba010f303e666e19f86e4800f1fbf SHA1-hash: 5ae71b000b15805f95f38c08c45972d51ce3d027 (ca. 71MB) | R 3.3.3 binary for Mac OS X 10.9 (Mavericks) and higher, signed package. Contains R 3.3.3 framework, R.app GUI 1.69 in 64-bit for Intel Macs, Tcl/Tk 8.6.0 X11 libraries and Texinfo 5.2. The latter two components are optional and can be ommitted when choosing 'custom install', it is only needed if you want to use the tcltk R package or build package documentation from sources. Note: the use of X11 (including tcltk) requires XQuartz to be installed since it is no longer part of OS X. Always re-install XQuartz when upgrading your OS X to a new major version. |
| R-3.2.1-snowleopard.pkg MD5-hash: 58fe9d01314d9cb75ff80ccfb914fd65 SHA1-hash: be6e91db12bac22a324f0cb51c7efa9063ece0d0 (ca. 68MB) | R 3.2.1 legacy binary for Mac OS X 10.6 (Snow Leopard) - 10.8 (Mountain Lion), signed package. Contains R 3.2.1 framework, R.app GUI 1.66 in 64-bit for Intel Macs. This package contains the R framework, 64-bit GUI (R.app), Tcl/Tk 8.6.0 X11 libraries and Texinfop 5.2. GNU Fortran is NOT included (needed if you want to compile packages from sources that contain FORTRAN code) please see the tools directory. NOTE: the binary support for OS X before Mavericks is being phased out, we do not expect further releases! |
R Sig Mac Problem Loading Tcl Tk Interface On R For Macs
Subdirectories:
| tools | Additional tools necessary for building R for Mac OS X: Universal GNU Fortran compiler for Mac OS X (see R for Mac tools page for details). |
| base | Binaries of R builds for macOS 10.13 or higher (High Sierra) |
| contrib | Binaries of package builds for macOS 10.13 or higher (High Sierra) |
| el-capitan | Binaries of package builds for OS X 10.11 or higher (El Capitan build) |
| mavericks | Binaries of package builds for Mac OS X 10.9 or higher (Mavericks build) |
| old | Previously released R versions for Mac OS X |
You may also want to read the R FAQ and R for Mac OS X FAQ. For discussion of Mac-related topics and reporting Mac-specific bugs, please use the R-SIG-Mac mailing list.
Information, tools and most recent daily builds of the R GUI, R-patched and R-devel can be found at http://mac.R-project.org/. Please visit that page especially during beta stages to help us test the Mac OS X binaries before final release!
Package maintainers should visit CRAN check summary page to see whether their package is compatible with the current build of R for Mac OS X.
Binary libraries for dependencies not present here are available from http://mac.R-project.org/libs and corresponding sources at http://mac.R-project.org/src.
Last modified: 2020/10/10, by Simon Urbanek